CSI-ENS Bioinformatics Workshop Series 2018

Registration for this workshop series is now CLOSED. 

Scope and Topics

The CSI-ENS Bioinformatics Series are aimed at life scientists who have already produced, or are planning to perform RNA-seq and or ChIP-seq experiments and want to learn the best practice to analyze these type of data. It will consist of 4 workshops of theoretical lessons and practical exercises.

Participants will gain practical experience and skills to be able to:

  • Align RNA-seq data to a reference genome (Workshop 1)
  • Estimate known gene and transcript expression (Workshop 1)
  • Perform differential expression analysis (Workshop 1 and 2)
  • Characterise splicing variants from RNAseq (Workshop 2)
  • Analyse, visualize and summarize the output of ChIP-seq dataset (Workshop 3)
  • Model and analysis simple gene regulatory Networks (Workshop 4)

General Program

09:00 – 09:30  – Arrival and Registration
09:30 – 10:30  – Lecture
10:30 – 11:00  – Morning Refreshments
11:00 – 12:30  – Lecture
12.30 – 13.30  – Lunch
13:30 – 15:30  – Practical Course
15:30 – 16:00  – Afternoon Refreshments
16:00 – 18:00  – Practical Course

 

Date Venue Topic
6 Feb 2018
Tuesday
#13-02N
Conference room,MD6
Workshop 1
Introduction to RNAseq analysis: From reads to gene expression.
12 Feb 2018
Monday
#11-02N
Conference room,MD6
Workshop 2
RNA Analysis: Advance analysis and data visualisation (prerequisite Workshop 1)
26 Feb 2018
Monday
#11-02N
Conference room,MD6
Workshop 3
ChIPseq analysis and data integration
2 March 2018
Friday
#12-02N,
Conference room,MD6
Workshop 4
Introduction to modelling and system biology

 

Important note: Tutorials will be performed on the CSI’s server. However, attendees are required to bring their own laptop to be able to connect to our server. We will provide all necessary software.